Description : component *(RPP1) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000349_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g48161 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G01100 | No alias | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
Adi_g041465 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g123329 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g22529 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g24282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g46228 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g54064 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g30739 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g11087 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g23416 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g43913 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g19032 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g19763 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01019679001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038637001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
Gb_21696 | No alias | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08838 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_10430200g0010 | No alias | component RPP1 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
MA_90134g0010 | No alias | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g22910 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g14549 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g32500 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c1_36220V3.1 | Pp3c1_36220 | 60S acidic ribosomal protein family | 0.01 | OrthoFinder output from all 47 species | |
Pp3c23_18100V3.1 | Pp3c23_18100 | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
Pp3c8_22380V3.1 | Pp3c8_22380 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g07968 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g15777 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g26656 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g27988 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g05395 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g20755 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26274 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
Sam_g31849 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g32024 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g40694 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g41052 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g41870 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g49082 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Smo133023 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g016470.3.1 | Solyc01g016470 | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Spa_g28442 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g34210 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g37176 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g37759 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e021844_P001 | Zm00001e021844 | component RPP1 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e029197_P001 | Zm00001e029197 | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0004129 | cytochrome-c oxidase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009060 | aerobic respiration | IEP | HCCA |
MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0045333 | cellular respiration | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |