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  5. Sam_g48098

Sam_g48098


Description : component *(uL29) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48098

Target Alias Description ECC score Gene Family Method Actions
Adi_g120586 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g124107 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g22468 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g24019 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g31264 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g17943 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g31826 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g16217 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g03536 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g37803 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05963 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g05972 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g06030 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g31723 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g36756 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g46162 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g46978 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!