Sam_g48072

Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g48072
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00214810	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
AT3G49910	No alias	Translation protein SH3-like family protein	0.04	OrthoFinder output from all 47 species
Adi_g121686	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g37339	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g18010	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.60	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre01.g040000	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g26942	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Gb_05675	No alias	component RPL26 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Gb_06102	No alias	component RPL26 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os01g04730.1	LOC_Os01g04730	component RPL26 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Len_g44310	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_13141g0010	No alias	component RPL26 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_158811g0010	No alias	component RPL26 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp2g12870.1	No alias	component RPL26 of LSU proteome component	0.01	OrthoFinder output from all 47 species
Nbi_g21060	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c14_25170V3.1	Pp3c14_25170	Translation protein SH3-like family protein	0.02	OrthoFinder output from all 47 species
Pp3c1_25000V3.1	Pp3c1_25000	Translation protein SH3-like family protein	0.03	OrthoFinder output from all 47 species
Pp3c2_15910V3.1	Pp3c2_15910	Translation protein SH3-like family protein	0.02	OrthoFinder output from all 47 species
Ppi_g23265	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g33996	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g36832	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo227399	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Solyc02g064670.1.1	Solyc02g064670	component RPL26 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc03g044000.1.1	Solyc03g044000	component RPL26 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g43201	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g54872	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0019825	oxygen binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005756	Ribosomal_L26/L24P_euk/arc	8	122

External Links

No external refs found!

Sam_g48072

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation