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  5. Sam_g47972

Sam_g47972


Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47972
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT2G45170 ATG8E, ATATG8E AUTOPHAGY 8E 0.02 OrthoFinder output from all 47 species
Ceric.21G035500.1 ATG8D, Ceric.21G035500 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01001307001 ATG8F Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 77 180
No external refs found!