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  5. Sam_g47852

Sam_g47852


Description : regulatory mediator of IRE1-bZIP60 UPR pathway & original description: none


Gene families : OG0000429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47852

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00107900 SVB,... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s05043p00002670 SVB,... No description available 0.03 OrthoFinder output from all 47 species
AT1G09310 No alias Protein of unknown function, DUF538 0.03 OrthoFinder output from all 47 species
Als_g44068 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Als_g50063 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Aob_g18964 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.07 OrthoFinder output from all 47 species
LOC_Os06g34790.1 SVB, LOC_Os06g34790 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os10g37400.1 LOC_Os10g37400 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g24793 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.05 OrthoFinder output from all 47 species
MA_128814g0010 SVB no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_73238g0010 SVB no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp1g00970.1 SVB no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g07566 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.01 OrthoFinder output from all 47 species
Ore_g17662 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013756 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026510 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Sam_g01684 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Sam_g47853 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.04 OrthoFinder output from all 47 species
Solyc01g100750.2.1 SVB, Solyc01g100750 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g076890.1.1 Solyc02g076890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g30327 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Spa_g46494 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Spa_g56336 No alias regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.02 OrthoFinder output from all 47 species
Zm00001e020299_P001 Zm00001e020299 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 85 199
No external refs found!