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  5. Sam_g47309

Sam_g47309


Description : component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex & original description: none


Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47309
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Als_g40357 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ceric.23G080700.1 Ceric.23G080700 component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ceric.32G024000.1 Ceric.32G024000 component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Dac_g26124 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
GSVIVT01037374001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.05 OrthoFinder output from all 47 species
Gb_07694 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g46750.1 LOC_Os07g46750 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Len_g09861 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Lfl_g22805 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Lfl_g24793 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
MA_102713g0020 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.02 OrthoFinder output from all 47 species
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Ppi_g47971 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g12733 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.06 OrthoFinder output from all 47 species
Sam_g15471 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g17349 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.07 OrthoFinder output from all 47 species
Sam_g31515 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Sam_g47970 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Sam_g49095 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.07 OrthoFinder output from all 47 species
Solyc01g098000.3.1 Solyc01g098000 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.02 OrthoFinder output from all 47 species
Solyc11g072190.2.1 Solyc11g072190 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Spa_g07922 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Spa_g12874 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Spa_g21700 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Spa_g40023 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g51035 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0008190 eukaryotic initiation factor 4E binding IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0045947 negative regulation of translational initiation IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018940 EF-1_beta_acid_region_euk 146 174
IPR014038 EF1B_bsu/dsu_GNE 186 269
No external refs found!