- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(eS10) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001341_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g46529 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00221160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075195 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001164.5 | No alias | 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g34048 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g50620 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g35090.1 | LOC_Os04g35090 | component RPS10 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g39895 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07647 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g25015 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g42638 | No alias | lysine-rich arabinogalactan protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g099670.3.1 | Solyc01g099670 | component RPS10 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g096540.2.1 | Solyc12g096540 | component RPS10 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g13745 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g36180 | No alias | component *(eS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0003785 | actin monomer binding | IEP | HCCA |
| BP | GO:0007015 | actin filament organization | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005326 | S10_plectin_N | 3 | 94 |
| No external refs found! |