Sam_g46270


Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46270

Target Alias Description ECC score Gene Family Method Actions
Adi_g056707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109098 LGT1, GAUT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11212 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Aop_g62565 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21220.t1 GAUT8, QUA1,... glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29407.t1 LGT1, GAUT1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38504.t1 LGT4, GAUT10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67868.t1 GAUT8, QUA1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G086500.1 GAUT13, Ceric.03G086500 not classified & original description: pacid=50571381... 0.02 OrthoFinder output from all 47 species
Ceric.39G020500.1 GAUT9, Ceric.39G020500 not classified & original description: pacid=50583275... 0.03 OrthoFinder output from all 47 species
Ceric.39G026400.1 LGT4, GAUT10,... not classified & original description: pacid=50582557... 0.02 OrthoFinder output from all 47 species
Dde_g08295 GAUT14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003922001 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g21250.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g48370.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
MA_10429440g0010 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g06782 GAUT13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35594 LGT4, GAUT10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33568 GAUT14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31350 GAUT7, LGT7 component *(GAUT7) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005216 LGT1, GAUT1 not classified & original description: CDS=1-1323 0.02 OrthoFinder output from all 47 species
Sam_g15907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo440751 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g093970.4.1 LGT1, GAUT1,... component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.04 OrthoFinder output from all 47 species
Solyc03g013630.4.1 GAUT13, Solyc03g013630 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g114810.3.1 GAUT11, Solyc03g114810 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g064490.3.1 LGT4, GAUT10,... Probable galacturonosyltransferase 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e018135_P001 GAUT14, Zm00001e018135 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023901_P001 GAUT9, Zm00001e023901 Probable galacturonosyltransferase 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!