Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00177850 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
AT2G27710 | No alias | 60S acidic ribosomal protein family | 0.07 | OrthoFinder output from all 47 species | |
AT2G27720 | No alias | 60S acidic ribosomal protein family | 0.05 | OrthoFinder output from all 47 species | |
AT3G44590 | No alias | 60S acidic ribosomal protein family | 0.05 | OrthoFinder output from all 47 species | |
Adi_g019936 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g083303 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g084794 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g118574 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g24871 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g48775 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g55993 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Aob_g08057 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g18712 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g30715 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g06840 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g20569 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g20777 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g32069 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g40394 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g54753 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0013.g013340 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0076.g037804 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g47241 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g50883 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g74453 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g03976 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g28530 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g45668 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g31241 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g34853 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g36046 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01031366001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01033814001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
Gb_39007 | No alias | component RPP2 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g09510.4 | LOC_Os01g09510 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g15507 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g20519 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
MA_10431146g0010 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
MA_177584g0010 | No alias | component RPP2 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
MA_8598039g0010 | No alias | component RPP2 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp1g18620.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Msp_g12854 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g33244 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g34262 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g40276 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g16311 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g02415 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g23184 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g35760 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g62746 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g10174 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g44372 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g50056 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g62192 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g00046 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g08492 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g17151 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g22627 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g23353 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g23852 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g23854 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g32985 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g38961 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g39823 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g40093 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g40309 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g42557 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g45227 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g46268 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g46730 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g48423 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo139397 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g074430.4.1 | Solyc06g074430 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Spa_g39239 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g40832 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
Tin_g12451 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g21399 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e006597_P001 | Zm00001e006597 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026591_P001 | Zm00001e026591 | component RPP2 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e026592_P001 | Zm00001e026592 | component RPP2 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e026593_P001 | Zm00001e026593 | component RPP2 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005740 | mitochondrial envelope | IEP | HCCA |
CC | GO:0005751 | mitochondrial respiratory chain complex IV | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009060 | aerobic respiration | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019646 | aerobic electron transport chain | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
CC | GO:0031967 | organelle envelope | IEP | HCCA |
CC | GO:0031975 | envelope | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
CC | GO:0045277 | respiratory chain complex IV | IEP | HCCA |
BP | GO:0045333 | cellular respiration | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |