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  5. Sam_g45871

Sam_g45871


Description : not classified & original description: none


Gene families : OG0002079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45871
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aob_g33924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g51715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g42998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48026 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000742 EGF-like_dom 211 242
IPR002557 Chitin-bd_dom 302 344
IPR002557 Chitin-bd_dom 156 203
No external refs found!