Sam_g45869


Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45869

Target Alias Description ECC score Gene Family Method Actions
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.03 OrthoFinder output from all 47 species
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.03 OrthoFinder output from all 47 species
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 OrthoFinder output from all 47 species
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 OrthoFinder output from all 47 species
AT3G11440 ATMYB65, MYB65 myb domain protein 65 0.02 OrthoFinder output from all 47 species
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 OrthoFinder output from all 47 species
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 OrthoFinder output from all 47 species
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.02 OrthoFinder output from all 47 species
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.03 OrthoFinder output from all 47 species
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.02 OrthoFinder output from all 47 species
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 OrthoFinder output from all 47 species
AT5G59780 ATMYB59-1,... myb domain protein 59 0.03 OrthoFinder output from all 47 species
Adi_g009266 AtMYB107, MYB107 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012798 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aev_g06971 AtMYB83, MYB83 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g41043 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g12680 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15104.t1 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21421.t1 AtMYB20, MYB20,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30134.t1 AtMYB17, MYB17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011623 MYB8, HOS10 not classified & original description: CDS=1-834 0.03 OrthoFinder output from all 47 species
Ceric.17G059200.1 ATMYB61, MYB61,... not classified & original description: pacid=50617474... 0.02 OrthoFinder output from all 47 species
Dac_g21465 AtMYB20, MYB20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19944 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g21227 AtMYB17, MYB17 accessory protein (LMI2) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Dde_g08952 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g16481 MYB3, ATMYB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004317001 AtMYB42, MYB42 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031341001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g28280.1 LOC_Os01g28280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59660.1 MYB33, ATMYB33,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g20090.1 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g27090.1 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g57346 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58682 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Lfl_g07957 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17349 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_162812g0020 ATMYB5, MYB5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_175772g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_437179g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_446064g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_460508g0010 ATMYB14, MYB14, MYB14AT transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_53373g0010 ATMYB5, MYB5 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_81763g0010 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Nbi_g22220 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17491 DUO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25108 MYB103, AtMYB103 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36919 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43976 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g43977 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g45013 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09598 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26927 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003656 No alias not classified & original description: CDS=1-687 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010734 MYB9, AtMYB9 not classified & original description: CDS=1-1800 0.02 OrthoFinder output from all 47 species
Solyc02g087960.3.1 ATMYB94,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc03g121740.3.1 MYB26, ATMYB26,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc05g053330.3.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g04302 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38387 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14440 AtMYB107, MYB107 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21768 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001341_P001 ATMYB35, TDF1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e017036_P001 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e018186_P001 ATMYB59-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e035619_P002 MYB30, ATMYB30,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 1 33
IPR001005 SANT/Myb 39 84
No external refs found!