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  5. Sam_g45733

Sam_g45733


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45733

Target Alias Description ECC score Gene Family Method Actions
AT1G02890 No alias AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene38616.t1 Aspi01Gene38616 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008524001 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
LOC_Os01g43480.1 LOC_Os01g43480 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Msp_g15416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g072010.2.1 Solyc06g072010 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc06g072017.1.1 Solyc06g072017 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e038215_P002 Zm00001e038215 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!