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  5. Sam_g45680

Sam_g45680


Description : not classified & original description: none


Gene families : OG0003233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268690 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G20310 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G47740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
MA_10435940g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9281397g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008568 No alias not classified & original description: CDS=584-1549 0.03 OrthoFinder output from all 47 species
Solyc12g017840.2.1 Solyc12g017840 receptor-like protein kinase (RLCK-IXb) 0.03 OrthoFinder output from all 47 species
Zm00001e030996_P002 Zm00001e030996 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 8 134
No external refs found!