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  5. Sam_g45533

Sam_g45533


Description : component *(uL10) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45533

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00231170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT3G09200 No alias Ribosomal protein L10 family protein 0.02 OrthoFinder output from all 47 species
AT3G11250 No alias Ribosomal protein L10 family protein 0.03 OrthoFinder output from all 47 species
Aop_g13520 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.18G048600.1 Ceric.18G048600 component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Cre12.g520500 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os11g04070.1 LOC_Os11g04070 component RPP0 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os12g03880.1 LOC_Os12g03880 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Len_g16154 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Nbi_g05238 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c1_8280V3.1 Pp3c1_8280 Ribosomal protein L10 family protein 0.02 OrthoFinder output from all 47 species
Ppi_g29176 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12721 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Solyc05g054580.3.1 Solyc05g054580 component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e021786_P001 Zm00001e021786 component RPP0 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e029292_P001 Zm00001e029292 component RPP0 of LSU proteome component 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR040637 RL10P_insert 4 52
No external refs found!