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Description : C2H2-type subclass ZAT transcription factor & original description: none
Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g29901 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G03510 | No alias | C2H2-type zinc finger family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G43170 | AZF3, ZF3 | zinc-finger protein 3 | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g002313 | No alias | C2H2-type subclass ZAT transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g108538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26594 | CZF2, ZAT6, C2H2 | C2H2-type subclass ZAT transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54086.t1 | Aspi01Gene54086 | regulatory protein *(DAZ) of male germ cell division &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G042600.1 | Ceric.13G042600 | C2H2-type subclass ZAT transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30808 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g62190.1 | LOC_Os01g62190 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g32220.1 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g41390.1 | AZF2, ZF2, LOC_Os03g41390 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g60570.1 | LOC_Os03g60570 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g02390.1 | RHL41, ZAT12,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g20580.1 | AZF1, ZF1, LOC_Os08g20580 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g39400.1 | ZAT10, STZ,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g29411 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33794 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28757 | No alias | C2H2-type subclass ZAT transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| MA_23050g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077980.1.1 | ZAT10, STZ,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g054650.1.1 | Solyc05g054650 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g088390.1.1 | ZAT10, STZ,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g088400.1.1 | Solyc12g088400 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005777_P001 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006184_P001 | Zm00001e006184 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011756_P001 | Zm00001e011756 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e011983_P001 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019350_P001 | Zm00001e019350 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e023551_P001 | Zm00001e023551 | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e030114_P001 | Zm00001e030114 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| MF | GO:0008061 | chitin binding | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |