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  5. Lfl_g29825

Lfl_g29825 (ATCOX6B2, COX6B)


Aliases : ATCOX6B2, COX6B

Description : component *(COX6b) of cytochrome c oxidase complex & original description: none


Gene families : OG0001692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29825
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00250560 ATCOX6B2, COX6B,... Cellular respiration.oxidative... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00135210 evm_27.TU.AmTr_v1... Cellular respiration.oxidative... 0.03 OrthoFinder output from all 47 species
AT4G28060 No alias Cytochrome c oxidase, subunit Vib family protein 0.07 OrthoFinder output from all 47 species
Dcu_g22192 No alias component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01023725001 No alias Cellular respiration.oxidative... 0.06 OrthoFinder output from all 47 species
LOC_Os03g27290.1 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Mp4g01650.1 No alias component COX6b of cytochrome c oxidase complex 0.05 OrthoFinder output from all 47 species
Pir_g16995 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Solyc07g006265.1.1 Solyc07g006265 component COX6b of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species
Spa_g17081 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Tin_g27353 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e037987_P004 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR003213 Cyt_c_oxidase_su6B 70 129
No external refs found!