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  5. Sam_g44457

Sam_g44457


Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g44457

Target Alias Description ECC score Gene Family Method Actions
AT4G34555 No alias Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Adi_g007622 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Adi_g042160 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g12873 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g41396 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001572 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Cba_g29833 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g70462 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.5 No alias 40S ribosomal protein S25-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre08.g382500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01023806001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44480.1 LOC_Os08g44480 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os09g39540.1 LOC_Os09g39540 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os11g05562.1 LOC_Os11g05562 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Len_g55277 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_104137g0010 No alias component RPS25 of SSU proteome 0.01 OrthoFinder output from all 47 species
Msp_g34942 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Msp_g39276 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Nbi_g33416 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g19918 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017022 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Sam_g28475 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g42051 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g48440 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e003921_P001 Zm00001e003921 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e019589_P001 Zm00001e019589 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e022058_P001 Zm00001e022058 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 2 87
No external refs found!