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  5. Lfl_g29782

Lfl_g29782 (SUA)


Aliases : SUA

Description : not classified & original description: none


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29782
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00089100 SUA,... SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G54230 SUA suppressor of abi3-5 0.08 OrthoFinder output from all 47 species
Adi_g014405 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058381 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g105523 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24331 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24332 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g20905 SUA not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g63953 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19169 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21507.t1 SUA, Aspi01Gene21507 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52467.t1 SUA, Aspi01Gene52467 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0081.g038607 SUA not classified & original description: CDS=99-2927 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048912 SUA not classified & original description: CDS=110-3388 0.04 OrthoFinder output from all 47 species
Cba_g10659 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31749 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G030500.1 SUA, Ceric.01G030500 not classified & original description: pacid=50592465... 0.08 OrthoFinder output from all 47 species
Ceric.22G052600.1 SUA, Ceric.22G052600 not classified & original description: pacid=50613886... 0.13 OrthoFinder output from all 47 species
Cre03.g184350 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g21696 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28893 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g39059 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02935 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20662 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013204001 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Gb_12277 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07070.1 SUA, LOC_Os02g07070 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Len_g07229 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55563 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10091679g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Nbi_g09118 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g07127 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g10790 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16565 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20001 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49398 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g25177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38762 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Smo402018 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Spa_g06702 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07600 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13781 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15554 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e028204_P003 SUA, Zm00001e028204 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR041591 OCRE 632 681
IPR000504 RRM_dom 500 566
IPR000504 RRM_dom 338 407
IPR000467 G_patch_dom 1015 1056
No external refs found!