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  5. Lfl_g29755

Lfl_g29755


Description : not classified & original description: none


Gene families : OG0005851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29755

Target Alias Description ECC score Gene Family Method Actions
Adi_g058816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03300 MEE40 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G096400.1 Ceric.03G096400 not classified & original description: pacid=50573029... 0.03 OrthoFinder output from all 47 species
Ceric.27G070600.1 Ceric.27G070600 not classified & original description: pacid=50604908... 0.04 OrthoFinder output from all 47 species
Ceric.36G047600.1 Ceric.36G047600 not classified & original description: pacid=50568483... 0.05 OrthoFinder output from all 47 species
Dcu_g12012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g28635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002605 No alias not classified & original description: CDS=1-2034 0.04 OrthoFinder output from all 47 species
Tin_g20117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 411 460
IPR002885 Pentatricopeptide_repeat 589 616
IPR002885 Pentatricopeptide_repeat 346 374
IPR002885 Pentatricopeptide_repeat 553 578
IPR002885 Pentatricopeptide_repeat 484 512
IPR002885 Pentatricopeptide_repeat 623 652
No external refs found!