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  5. Sam_g43928

Sam_g43928


Description : beta-1,4-galactosyltransferase *(GALS) & original description: none


Gene families : OG0000987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g43928

Target Alias Description ECC score Gene Family Method Actions
AT3G60990 No alias Domain of unknown function (DUF23) 0.02 OrthoFinder output from all 47 species
AT5G48190 No alias Domain of unknown function (DUF23) 0.02 OrthoFinder output from all 47 species
Adi_g104474 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Aob_g08331 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.05 OrthoFinder output from all 47 species
Dac_g39044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46750 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01013454001 No alias Cell wall.pectin.rhamnogalacturonan... 0.02 OrthoFinder output from all 47 species
Lfl_g04730 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e037549_P001 Zm00001e037549 beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 339 453
No external refs found!