Aliases : YLS8
Description : component *(YLS8) of U5 snRNP complex & original description: none
Gene families : OG0003359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01018060001 | YLS8 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g34520.1 | YLS8, LOC_Os10g34520 | protein factor U5-15kDa/YLS8 of U5 small nuclear... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10881 | YLS8 | component *(YLS8) of U5 snRNP complex & original... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | Interproscan |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0005048 | signal sequence binding | IEP | HCCA |
CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007031 | peroxisome organization | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031903 | microbody membrane | IEP | HCCA |
BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
MF | GO:0042277 | peptide binding | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
BP | GO:0051235 | maintenance of location | IEP | HCCA |
BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004123 | Dim1 | 4 | 136 |
No external refs found! |