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  5. Lfl_g29582

Lfl_g29582 (TCH3, ATCAL4)


Aliases : TCH3, ATCAL4

Description : not classified & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29582

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G21550 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Adi_g051954 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00406 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05860 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08071 CML43 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04699 CML42 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05225 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03447 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27706 CML42 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27813 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57706 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g02922 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13274 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14961 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31301 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36467 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12298 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06373.t1 UNE14, Aspi01Gene06373 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06375.t1 UNE14, Aspi01Gene06375 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene11697.t1 CML42, Aspi01Gene11697 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34652.t1 CML42, Aspi01Gene34652 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene34915.t1 UNE14, Aspi01Gene34915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40816.t1 UNE14, Aspi01Gene40816 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40818.t1 UNE14, Aspi01Gene40818 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40819.t1 UNE14, Aspi01Gene40819 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37531 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g42977 UNE14 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.04 OrthoFinder output from all 47 species
Ceric.25G037500.1 CML42, Ceric.25G037500 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g04202 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09200 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12031 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12957 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17897 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45457 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00701 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02262 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03398 CML42 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g16822 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029852001 CML42 Calcium-binding allergen Bet v 3 OS=Betula pendula 0.03 OrthoFinder output from all 47 species
Gb_09082 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28442 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_30819 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os05g24780.1 CML42, LOC_Os05g24780 Probable calcium-binding protein CML21 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os07g48340.1 CML42, LOC_Os07g48340 Probable calcium-binding protein CML24 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24580.1 LOC_Os09g24580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432950g0010 CML41 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18054g0010 CML43 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_18054g0030 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_224196g0010 CML42 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_472945g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_641437g0010 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_66990g0010 UNE14 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9257733g0010 UNE14 Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species
Mp5g22000.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g18000.1 UNE14 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g20440.1 CML42 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Ore_g25919 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03113 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18052 AGD11 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g21574 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27455 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16755 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03755 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16164 CML42 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21388 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47923 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51233 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 5 29
IPR002048 EF_hand_dom 87 108
No external refs found!