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  5. Sam_g42172

Sam_g42172


Description : not classified & original description: none


Gene families : OG0005726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g42172

Target Alias Description ECC score Gene Family Method Actions
Aev_g14440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024104001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_18575 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10266689g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429832g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo418814 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc10g054860.2.1 Solyc10g054860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g57103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!