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  5. Lfl_g29467

Lfl_g29467 (ATGID1C, GID1C)


Aliases : ATGID1C, GID1C

Description : gibberellin receptor *(GID1) & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29467

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00197p00041400 ATGID1C, GID1C,... Phytohormones.gibberellin.perception and signal... 0.04 OrthoFinder output from all 47 species
AT1G49640 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g054841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10996 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04341 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15753 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g50645 ATCXE12, CXE12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G023800.1 ATCXE12, CXE12,... not classified & original description: pacid=50568498... 0.03 OrthoFinder output from all 47 species
Ceric.36G031100.1 CXE17, AtCXE17,... not classified & original description: pacid=50568554... 0.03 OrthoFinder output from all 47 species
Ceric.37G015600.1 CXE17, AtCXE17,... not classified & original description: pacid=50616716... 0.03 OrthoFinder output from all 47 species
Dac_g16000 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g06830.1 LOC_Os07g06830 Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g28650.1 ATCXE12, CXE12,... Tuliposide A-converting enzyme b1, amyloplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28740.1 LOC_Os09g28740 Probable carboxylesterase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28750.1 CXE13, ATCXE13,... Tuliposide A-converting enzyme 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g14259 CXE13, ATCXE13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14260 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437184g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g10582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35036 CXE20, AtCXE20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44795 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07156 AtCXE18, CXE18 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017757 No alias not classified & original description: CDS=1-1095 0.03 OrthoFinder output from all 47 species
Solyc10g050880.2.1 ATCXE12, CXE12,... Probable carboxylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g045460.3.1 Solyc11g045460 Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g056674.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g056678.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g150125.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g05601 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12487 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027068_P001 Zm00001e027068 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 104 320
No external refs found!