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Description : not classified & original description: none
Gene families : OG0000349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000349_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g41052 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00100p00050800 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G01100 | No alias | 60S acidic ribosomal protein family | 0.08 | OrthoFinder output from all 47 species | |
| AT4G00810 | No alias | 60S acidic ribosomal protein family | 0.05 | OrthoFinder output from all 47 species | |
| AT5G47700 | No alias | 60S acidic ribosomal protein family | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g041465 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g041466 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g046670 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107171 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g120732 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g41558 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46803 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38055 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g09794 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g11867 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g10155 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22529 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g24282 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g29611 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g31541 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g46228 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g39390 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g64518 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G004600.1 | Ceric.21G004600 | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000342.4 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g30739 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g11087 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g23416 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01019679001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01038637001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_21696 | No alias | component RPP1 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g02340.1 | LOC_Os08g02340 | component RPP1 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g08838 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g26215 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10430200g0010 | No alias | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| MA_90134g0010 | No alias | component RPP1 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g22910 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g14549 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_36220V3.1 | Pp3c1_36220 | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c20_2800V3.1 | Pp3c20_2800 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c23_18100V3.1 | Pp3c23_18100 | 60S acidic ribosomal protein family | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c8_22380V3.1 | Pp3c8_22380 | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g43162 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g03056 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13616 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26274 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g31849 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38585 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38962 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g41870 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g43338 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48161 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo133023 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g016470.3.1 | Solyc01g016470 | component RPP1 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g03569 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g42994 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021844_P001 | Zm00001e021844 | component RPP1 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029197_P001 | Zm00001e029197 | component RPP1 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |