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  5. Sam_g40963

Sam_g40963


Description : not classified & original description: none


Gene families : OG0002937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40963
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G055400.1 ATMGH3, MGH3,... not classified & original description: pacid=50588581... 0.02 OrthoFinder output from all 47 species
Ceric.12G085600.1 Ceric.12G085600 not classified & original description: pacid=50602037... 0.02 OrthoFinder output from all 47 species
Ceric.29G026100.1 ATMGH3, MGH3,... not classified & original description: pacid=50625844... 0.03 OrthoFinder output from all 47 species
Ceric.37G007500.1 ATMGH3, MGH3,... not classified & original description: pacid=50616497... 0.02 OrthoFinder output from all 47 species
Solyc04g049470.2.1 Solyc04g049470 Histone H3.3a OS=Lilium longiflorum (sp|q402e2|h33a_lillo : 92.4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 130
No external refs found!