Sam_g40756


Description : clathrin uncoating protein *(AUL) & original description: none


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40756

Target Alias Description ECC score Gene Family Method Actions
AT4G12780 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g007785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015102 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016064 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055215 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18474 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27951 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42812.t1 Aspi01Gene42812 clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45636.t1 Aspi01Gene45636 clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011410 No alias clathrin uncoating protein *(AUL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G030600.1 Ceric.22G030600 clathrin uncoating protein *(AUL) & original... 0.08 OrthoFinder output from all 47 species
Ceric.22G037800.1 Ceric.22G037800 not classified & original description: pacid=50614532... 0.03 OrthoFinder output from all 47 species
Dcu_g11003 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45942 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10033 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21287 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06489 No alias clathrin uncoating protein (AUL) 0.03 OrthoFinder output from all 47 species
LOC_Os01g25320.1 LOC_Os01g25320 clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
LOC_Os01g44310.1 LOC_Os01g44310 clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
LOC_Os11g43950.1 LOC_Os11g43950 clathrin uncoating protein (AUL) 0.01 OrthoFinder output from all 47 species
LOC_Os12g36180.1 LOC_Os12g36180 clathrin uncoating protein (AUL) 0.03 OrthoFinder output from all 47 species
Len_g29165 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16226 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
MA_33378g0010 No alias clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
Ore_g25581 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32492 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16139 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26695 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039690_P002 Zm00001e039690 clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!