Sam_g40709


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40709

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
Adi_g005728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036822 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g064984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066608 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100622 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106007 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15138 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g20209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20647 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19105 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28530 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48598 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54729 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07418 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.05 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.07 OrthoFinder output from all 47 species
Dac_g35959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45686 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11830 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g53562 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 382 429
IPR002885 Pentatricopeptide_repeat 80 127
IPR002885 Pentatricopeptide_repeat 181 228
IPR002885 Pentatricopeptide_repeat 256 282
IPR002885 Pentatricopeptide_repeat 284 313
IPR002885 Pentatricopeptide_repeat 357 380
No external refs found!