Description : component *(eL37) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0002755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002755_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g40680 | |
Cluster | HCCA: Cluster_78 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00109p00029660 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT1G52300 | No alias | Zinc-binding ribosomal protein family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G16080 | No alias | Zinc-binding ribosomal protein family protein | 0.03 | OrthoFinder output from all 47 species | |
Aop_g18943 | No alias | component *(eL37) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.13G060700.1 | Ceric.13G060700 | component *(eL37) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g430400 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017081001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01035677001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Gb_29003 | No alias | component RPL37 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Gb_33514 | No alias | component RPL37 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g56990.1 | LOC_Os02g56990 | component RPL37 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g03450.1 | LOC_Os08g03450 | component RPL37 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
MA_129829g0010 | No alias | component RPL37 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Mp2g12400.1 | No alias | component RPL37 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Pp3c18_13160V3.1 | Pp3c18_13160 | Zinc-binding ribosomal protein family protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c20_2550V3.1 | Pp3c20_2550 | Zinc-binding ribosomal protein family protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c21_9910V3.1 | Pp3c21_9910 | Zinc-binding ribosomal protein family protein | 0.04 | OrthoFinder output from all 47 species | |
Pp3c23_17260V3.1 | Pp3c23_17260 | Zinc-binding ribosomal protein family protein | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g23107 | No alias | component *(eL37) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g066660.4.1 | Solyc06g066660 | component RPL37 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g068180.3.1 | Solyc08g068180 | component RPL37 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001908_P001 | Zm00001e001908 | component RPL37 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013434_P001 | Zm00001e013434 | component RPL37 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006465 | signal peptide processing | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0007155 | cell adhesion | IEP | HCCA |
BP | GO:0007160 | cell-matrix adhesion | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0031589 | cell-substrate adhesion | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001569 | Ribosomal_L37e | 2 | 54 |
No external refs found! |