Sam_g40488


Description : not classified & original description: none


Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40488

Target Alias Description ECC score Gene Family Method Actions
Adi_g076695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15247 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g17171 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024823001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_01281 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g05920.1 LOC_Os12g05920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g24505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426020g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_109416g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g42721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18248 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g031650.3.1 Solyc09g031650 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g45301 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Zm00001e020396_P001 Zm00001e020396 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027931_P001 Zm00001e027931 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!