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  5. Lfl_g29402

Lfl_g29402 (EIF4A-2)


Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A)) & original description: none


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g29402

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00181640 EIF4A-2,... Protein biosynthesis.translation initiation.mRNA... 0.04 OrthoFinder output from all 47 species
Adi_g078502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087856 EIF4A-III not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40134 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Aop_g13177 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12127 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g42587 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Ceric.21G079100.1 EIF4A-2, Ceric.21G079100 mRNA unwinding factor *(eIF4A)) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.22 EIF4A-III RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01015173001 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48750.2 EIF4A-2, LOC_Os06g48750 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Lfl_g04684 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g02760.1 EIF4A-2 mRNA unwinding factor (eIF4A) 0.05 OrthoFinder output from all 47 species
Msp_g08580 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34412 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g14903 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Pir_g30079 EIF4A-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_1080V3.1 EIF4A-2, Pp3c6_1080 eukaryotic translation initiation factor 4A1 0.01 OrthoFinder output from all 47 species
Pp3c7_3770V3.1 EIF4A-2, Pp3c7_3770 eukaryotic translation initiation factor 4A1 0.01 OrthoFinder output from all 47 species
Ppi_g03000 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Ppi_g15917 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23496 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g062800.4.1 EIF4A-2, Solyc06g062800 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
Solyc07g040750.2.1 EIF4A-2, Solyc07g040750 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Solyc08g062800.3.1 EIF4A-2, Solyc08g062800 mRNA unwinding factor (eIF4A) 0.06 OrthoFinder output from all 47 species
Tin_g05567 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 262 370
IPR011545 DEAD/DEAH_box_helicase_dom 61 222
No external refs found!