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  5. Sam_g40406

Sam_g40406


Description : protein involved in PS-I assembly *(PSA2) & original description: none


Gene families : OG0006306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40406

Target Alias Description ECC score Gene Family Method Actions
AT2G34860 EDA3 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g02822 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.06 OrthoFinder output from all 47 species
Aob_g35831 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g08229 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g70750 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G083000.1 EDA3, Ceric.04G083000 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01025384001 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
LOC_Os08g36140.1 EDA3, LOC_Os08g36140 PSA2 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
Mp4g08230.1 EDA3 PSA2 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
Nbi_g10835 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Ore_g19771 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species
Spa_g11512 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004359 glutaminase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!