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  5. Sam_g40321

Sam_g40321


Description : not classified & original description: none


Gene families : OG0000618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40321

Target Alias Description ECC score Gene Family Method Actions
AT1G10657 No alias Plant protein 1589 of unknown function 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010151 No alias not classified & original description: CDS=380-691 0.04 OrthoFinder output from all 47 species
Cba_g08630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G032800.1 Ceric.26G032800 not classified & original description: pacid=50599179... 0.03 OrthoFinder output from all 47 species
Ceric.38G016300.1 Ceric.38G016300 not classified & original description: pacid=50580303... 0.02 OrthoFinder output from all 47 species
GSVIVT01005962001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_626270g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g18609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g005230.3.1 Solyc05g005230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g44057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006476 CHP01589_pln 136 168
No external refs found!