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  5. Sam_g40280

Sam_g40280


Description : component *(ATG9) of autophagosome ATG9-2-18 membrane shuttling complex & original description: none


Gene families : OG0004129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40280
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00170950 APG9, ATAPG9,... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 OrthoFinder output from all 47 species
AT2G31260 APG9, ATAPG9 autophagy 9 (APG9) 0.05 OrthoFinder output from all 47 species
Cre09.g391500 APG9, ATAPG9 Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 OrthoFinder output from all 47 species
Gb_31273 APG9, ATAPG9 component ATG9 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
LOC_Os03g14380.1 APG9, ATAPG9,... component ATG9 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Spa_g06178 APG9, ATAPG9 component *(ATG9) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR007241 Autophagy-rel_prot_9 59 547
No external refs found!