Sam_g39878

Description : ER luminal lectin chaperone *(CRT) & original description: none

Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g39878

Target	Alias	Description	ECC score	Gene Family Method
AT1G56340	AtCRT1a, CRT1a, CRT1	calreticulin 1a	0.02	OrthoFinder output from all 47 species
Adi_g117234	AtCRT3, EBS2, CRT3, PSL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g26121	AtCRT1a, CRT1a, CRT1	ER luminal lectin chaperone *(CRT) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g13121	AtCRT1a, CRT1a, CRT1	ER luminal lectin chaperone *(CRT) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g11081	AtCRT1a, CRT1a, CRT1	ER luminal lectin chaperone *(CRT) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g18394	AtCRT3, EBS2, CRT3, PSL1	ER luminal lectin chaperone *(CRT) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g04588	AtCRT1a, CRT1a, CRT1	ER luminal lectin chaperone *(CRT) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023613	AtCRT1a, CRT1a, CRT1	ER luminal lectin chaperone *(CRT) & original...	0.02	OrthoFinder output from all 47 species
Smo144212	CRT1b, AtCRT1b	Protein modification.protein folding and quality...	0.02	OrthoFinder output from all 47 species
Solyc05g056230.4.1	AtCRT3, EBS2,...	lectin chaperone (CRT)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	Interproscan
BP	GO:0006457	protein folding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0051082	unfolded protein binding	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001580	Calret/calnex	45	280
IPR001580	Calret/calnex	282	355

External Links

No external refs found!