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  5. Sam_g39748

Sam_g39748


Description : component alpha of TATA box-binding protein NC2 regulator complex & original description: none


Gene families : OG0002663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39748
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Als_g00603 No alias component alpha of TATA box-binding protein NC2... 0.03 OrthoFinder output from all 47 species
Ehy_g14535 No alias component alpha of TATA box-binding protein NC2... 0.02 OrthoFinder output from all 47 species
Len_g07274 No alias component alpha of TATA box-binding protein NC2... 0.03 OrthoFinder output from all 47 species
MA_18751g0010 NF-YC11 component alpha of TATA box-binding protein NC2 regulator complex 0.02 OrthoFinder output from all 47 species
Mp1g16880.1 No alias component alpha of TATA box-binding protein NC2 regulator complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 8 71
No external refs found!