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  5. Sam_g39709

Sam_g39709


Description : adapter component *(SEU/SLK) of transcriptional co-repressor complex & original description: none


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39709

Target Alias Description ECC score Gene Family Method Actions
Ala_g14524 SEU adapter component *(SEU/SLK) of transcriptional... 0.01 OrthoFinder output from all 47 species
Als_g16066 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aob_g24030 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Cba_g12032 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Dac_g22707 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Dde_g35740 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
LOC_Os06g03600.1 SLK2, LOC_Os06g03600 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g05463 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Lfl_g02422 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Lfl_g05019 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
MA_33392g0010 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g38880 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Ppi_g60346 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022883 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Spa_g30401 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Spa_g30402 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Zm00001e018384_P001 SEU, Zm00001e018384 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 246 501
No external refs found!