Sam_g39625


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39625

Target Alias Description ECC score Gene Family Method Actions
Adi_g103810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62766.t1 Aspi01Gene62766 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0298.g063588 No alias not classified & original description: CDS=837-2690 0.03 OrthoFinder output from all 47 species
Cba_g22564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03119 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13997 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo74798 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc04g082970.4.1 Solyc04g082970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032746_P001 Zm00001e032746 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 417 532
IPR025757 MIP1_Leuzipper 96 175
No external refs found!