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  5. Sam_g39550

Sam_g39550


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0008019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39550

Target Alias Description ECC score Gene Family Method Actions
Solyc04g009360.3.1 Solyc04g009360 COMPASS-like H3K4 histone methylase component WDR5B... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 134 167
IPR001680 WD40_repeat 399 436
IPR001680 WD40_repeat 358 393
No external refs found!