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  5. Sam_g39438

Sam_g39438


Description : not classified & original description: none


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39438
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT1G78170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Adi_g012259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20660 No alias regulatory protein *(CFL) of cutin and suberin... 0.02 OrthoFinder output from all 47 species
Als_g02339 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Als_g04681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48908.t1 Aspi01Gene48908 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50293.t1 Aspi01Gene50293 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037205 No alias not classified & original description: CDS=1-378 0.04 OrthoFinder output from all 47 species
Ehy_g03466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_941055g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19849 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Sam_g39437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407839 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g009770.3.1 Solyc01g009770 CFL cutin and suberin biosynthesis regulator 0.02 OrthoFinder output from all 47 species
Zm00001e014649_P001 Zm00001e014649 CFL cutin and suberin biosynthesis regulator 0.02 OrthoFinder output from all 47 species
Zm00001e017869_P001 Zm00001e017869 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!