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Sam_g39407


Description : component *(NdhO) of NDH subcomplex A & original description: none


Gene families : OG0008903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39407

Target Alias Description ECC score Gene Family Method Actions
AT1G74880 NDH-O NAD(P)H:plastoquinone dehydrogenase complex subunit O 0.02 OrthoFinder output from all 47 species
Ala_g10682 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Als_g02747 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Aop_g06458 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Cba_g21960 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Ceric.1Z011100.1 NDH-O, Ceric.1Z011100 component *(NdhO) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Dcu_g10142 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Dde_g00121 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01026485001 NDH-O Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
Gb_30052 NDH-O component NdhO of NDH subcomplex A 0.02 OrthoFinder output from all 47 species
Lfl_g16986 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Mp4g21490.1 NDH-O component NdhO of NDH subcomplex A 0.05 OrthoFinder output from all 47 species
Nbi_g00196 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ore_g26404 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Pir_g10602 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018845 NDH-O assembly factor involved in RuBisCo assembly *(RbcX) &... 0.05 OrthoFinder output from all 47 species
Solyc11g006020.2.1 NDH-O, Solyc11g006020 component NdhO of NDH subcomplex A 0.03 OrthoFinder output from all 47 species
Spa_g10342 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Tin_g45495 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.09 OrthoFinder output from all 47 species
Zm00001e028287_P002 NDH-O, Zm00001e028287 component NdhO of NDH subcomplex A 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEA Interproscan
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR020905 NdhO 70 144
No external refs found!