Sam_g39157

Description : component *(POLD2) of DNA polymerase delta complex & original description: none

Gene families : OG0005379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005379_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g39157

Target	Alias	Description	ECC score	Gene Family Method
Adi_g000665	POLD2	component *(POLD2) of DNA polymerase delta complex &...	0.02	OrthoFinder output from all 47 species
Ala_g28468	POLD2	component *(POLD2) of DNA polymerase delta complex &...	0.02	OrthoFinder output from all 47 species
Cba_g22844	POLD2	component *(POLD2) of DNA polymerase delta complex &...	0.02	OrthoFinder output from all 47 species
Dac_g40826	POLD2	component *(POLD2) of DNA polymerase delta complex &...	0.03	OrthoFinder output from all 47 species
Gb_31965	POLD2	component POLD2 of DNA polymerase delta complex	0.02	OrthoFinder output from all 47 species
Solyc03g063340.3.1	POLD2, Solyc03g063340	component POLD2 of DNA polymerase delta complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
BP	GO:0006621	protein retention in ER lumen	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
MF	GO:0046923	ER retention sequence binding	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007185	DNA_pol_a/d/e_bsu	182	392
IPR040663	DNA_pol_D_N	35	162

External Links

No external refs found!