Sam_g38934

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g38934

Target	Alias	Description	ECC score	Gene Family Method
AT1G55850	ATCSLE1, CSLE1	cellulose synthase like E1	0.02	OrthoFinder output from all 47 species
Adi_g011565	IXR1, CEV1,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g014232	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Adi_g055475	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g067335	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Adi_g082474	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g082875	CESA5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g089068	IXR1, CEV1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g112515	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g117325	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Adi_g127602	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14910	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g04490	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g12758	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g30902	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g34036	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g40096	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g40118	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g27305	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aob_g27306	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.01G109400.1	ATH-A, CESA2,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ceric.13G049300.1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.32G060200.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g05773	MUR10, ATCESA7,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g30499	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g06173	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
GSVIVT01028234001	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
Gb_05828	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os03g59340.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os03g62090.1	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os06g02180.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
LOC_Os07g24190.1	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os08g25710.1	ATCSLD4, CSLD4,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
LOC_Os10g20090.1	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.02	OrthoFinder output from all 47 species
Len_g10968	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Len_g21269	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Len_g30331	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
MA_10434525g0010	ATH-A, CESA2, ATCESA2	Probable cellulose synthase A catalytic subunit 5...	0.02	OrthoFinder output from all 47 species
MA_10435322g0010	AtCESA1, RSW1, CESA1	Probable cellulose synthase A catalytic subunit 2...	0.03	OrthoFinder output from all 47 species
MA_2908g0010	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.02	OrthoFinder output from all 47 species
Ore_g18676	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29917	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g45080	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Pir_g31396	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Pnu_g06553	CESA09, CESA9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g32258	CESA4, NWS2, IRX5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g10495	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g16136	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22257	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Smo141535	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Smo85326	ATCSLD3, KJK, CSLD3	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.04	OrthoFinder output from all 47 species
Solyc01g087210.3.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc04g071650.4.1	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc08g061100.3.1	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Solyc12g056580.2.1	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Spa_g26496	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Spa_g26497	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Spa_g39367	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Spa_g49131	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Tin_g39887	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Zm00001e026711_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e037551_P002	CESA5, Zm00001e037551	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	1	686

External Links

No external refs found!

Sam_g38934

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation