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  5. Sam_g38875

Sam_g38875


Description : not classified & original description: none


Gene families : OG0002079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38875
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aob_g33923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31574 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g44518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g51715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g44274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g45871 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g48025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002557 Chitin-bd_dom 162 211
IPR000742 EGF-like_dom 217 248
No external refs found!