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  5. Sam_g38517

Sam_g38517


Description : not classified & original description: none


Gene families : OG0000907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38517
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT2G45980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Adi_g015100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06229 No alias cargo receptor protein *(ATI1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007706 No alias not classified & original description: CDS=1852-2460 0.03 OrthoFinder output from all 47 species
Solyc01g094770.4.1 Solyc01g094770 ATI1/2 autophagosome autophagic adapter protein 0.03 OrthoFinder output from all 47 species
Spa_g48691 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!