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  5. Sam_g38467

Sam_g38467


Description : transcriptional repressor *(NF-X1) & original description: none


Gene families : OG0006722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006722_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38467

Target Alias Description ECC score Gene Family Method Actions
AT1G10170 ATNFXL1, NFXL1 NF-X-like 1 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.42 ATNFXL1, NFXL1 NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os06g14190.1 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.02 OrthoFinder output from all 47 species
Ore_g30552 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036022_P001 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 839 854
IPR000967 Znf_NFX1 619 636
IPR000967 Znf_NFX1 690 701
IPR000967 Znf_NFX1 437 453
IPR000967 Znf_NFX1 555 572
IPR000967 Znf_NFX1 491 509
IPR000967 Znf_NFX1 729 746
No external refs found!