Sam_g38360

Description : component *(eS7) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001505_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g38360
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
Adi_g048829	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Adi_g103534	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Aop_g50244	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Aop_g68949	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Cre12.g498900	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
GSVIVT01008307001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01031018001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Gb_33823	No alias	component RPS7 of SSU proteome	0.03	OrthoFinder output from all 47 species
LOC_Os03g18570.1	LOC_Os03g18570	component RPS7 of SSU proteome	0.03	OrthoFinder output from all 47 species
LOC_Os03g18580.1	LOC_Os03g18580	component RPS7 of SSU proteome	0.02	OrthoFinder output from all 47 species
Mp6g08120.1	No alias	component RPS7 of SSU proteome	0.02	OrthoFinder output from all 47 species
Pp3c20_1360V3.1	Pp3c20_1360	Ribosomal protein S7e family protein	0.02	OrthoFinder output from all 47 species
Pp3c24_18220V3.1	Pp3c24_18220	Ribosomal protein S7e family protein	0.02	OrthoFinder output from all 47 species
Sam_g13288	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Sam_g52973	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Solyc03g119360.3.1	Solyc03g119360	component RPS7 of SSU proteome	0.03	OrthoFinder output from all 47 species
Solyc06g069090.3.1	Solyc06g069090	component RPS7 of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g43257	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004181	metallocarboxypeptidase activity	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0008235	metalloexopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000554	Ribosomal_S7e	8	188

External Links

No external refs found!

Sam_g38360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation