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  5. Sam_g38234

Sam_g38234


Description : solute transporter *(MTCC) & original description: none


Gene families : OG0002510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38234

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G061900.1 ATNDT1, NDT1,... solute transporter *(MTCC) & original description:... 0.05 OrthoFinder output from all 47 species
Lfl_g25575 ATNDT1, NDT1 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00507 ATNDT2, NDT2 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010194 ATNDT1, NDT1 solute transporter *(MTCC) & original description: CDS=337-1413 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017165 ATNDT1, NDT1 solute transporter *(MTCC) & original description: CDS=198-1259 0.03 OrthoFinder output from all 47 species
Solyc05g009020.4.1 ATNDT2, NDT2,... solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 311 396
IPR018108 Mitochondrial_sb/sol_carrier 204 297
IPR018108 Mitochondrial_sb/sol_carrier 99 188
No external refs found!