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  5. Sam_g38095

Sam_g38095


Description : calcium sensor *(CBL) & original description: none


Gene families : OG0000287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38095

Target Alias Description ECC score Gene Family Method Actions
AT5G24270 CBL4, ATSOS3, SOS3 Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Als_g45488 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25427.t1 CBL2, ATCBL2,... calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71106.t1 CBL4, ATSOS3,... calcium sensor *(CBL) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13307 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G063000.1 CBL9, ATCBL9,... calcium sensor *(CBL) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g01583 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19165 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20030 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29047 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17186 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038549001 CBL4, ATSOS3, SOS3 External stimuli response.salinity.SOS (Salt Overly... 0.04 OrthoFinder output from all 47 species
Len_g17715 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56843 ATCBL1, CBL1, SCABP5 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28074 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05105 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004089 CBL2, ATCBL2 calcium sensor *(CBL) & original description: CDS=972-2024 0.03 OrthoFinder output from all 47 species
Solyc12g055920.3.1 CBL4, ATSOS3,... Calcineurin B-like protein 4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Tin_g06538 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 109 154
IPR002048 EF_hand_dom 167 235
No external refs found!