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  5. Sam_g37866

Sam_g37866


Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37866
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004775 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019244 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086613 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34176 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G011100.1 HTB4, Ceric.18G011100 histone *(H2B) & original description: pacid=50622059... 0.02 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.02 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.02 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.85 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g273850 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Dac_g17045 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15681 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19972 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01025021001 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Gb_02245 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_25549 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_10435143g0010 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10435143g0020 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_454575g0010 HTB4 histone (H2B) 0.04 OrthoFinder output from all 47 species
Mp4g13450.1 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Mp6g07010.1 HTB4 histone (H2B) 0.02 OrthoFinder output from all 47 species
Msp_g35793 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41321 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14132 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c14_21050V3.1 HTB4, Pp3c14_21050 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c17_15780V3.1 Pp3c17_15780 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c6_27740V3.1 HTB4, Pp3c6_27740 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g61964 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.02 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46015 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06343 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.06 OrthoFinder output from all 47 species
Zm00001e016882_P001 HTB2, H2B, Zm00001e016882 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e041296_P001 HTB11, Zm00001e041296 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 117
No external refs found!